Cambridge BRC

Immunity and Infection - Recent Highlights

Section: 
Immunity and Infection

Two serious immune diseases hiding under one umbrella

Scientists supported by the NIHR and funded through the British Heart Foundation (BHF) have shed new light on a rare but deadly disease of the circulatory system. In a study published in the New England Journal of Medicine, researchers at the University of Cambridge and European Vasculitis Genetics Consortium showed that people diagnosed with ANCA- associated vasculitis fall into two different genetic groups, a discovery which could help lead to better ways of diagnosing and treating patients in the future.

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Affecting more than 9,000 people in the UK sufferers see their blood vessels - particularly in the kidney and lungs- attacked by their body's own white blood cells, which are supposed to patrol circulation to rid it of harmful invaders. The resulting inflammation can affect any organ but in particular causes kidney, lung and respiratory tract disease.

The researchers tracked down more that 1200 people in the UK and 1400 in Europe who were diagnosed with ANCA-associated vasculitis. Using cutting edge genetic analyses they showed that four genetic variants play a crucial role in causing the condition. All of the genes affected are involved in the body's natural response to infection and injury, and mistakes make the immune system more likely to turn on its own host.

Importantly, the scientists showed that patients with ANCA-associated vasculitis fell into two distinct groups, depending on which genetic variants they carried. In each case the body produces a different molecule, called an autoantibody; the result of which is the immune system turning against its own host.

The discovery is important because it could pave the way for new treatments in the future that could specifically tackle these two different auto immune diseases.

Dr Paul Lyons, Senior Research Associate at the Cambridge Institute of Medical Research (CIMR), one of the leaders of the study said:

''Our study demonstrates for the first time that ANCA-associated vasculitis is not really one condition, but two diseases with different causes hiding under one umbrella. Because the condition is rare this has been difficult to prove until now. Our key finding is that an important difference between two groups is in the genes, and not only in the symptoms we can see.''

Allergy (Ewan, Clark)

The BRC has recently provided support to assist in the clinical translation of a promising novel oral tolerance method to treat children with severe peanut allergy, which may have a major impact on clinical care in the shortmedium term (Clark AT et al. Successful oral tolerance induction in severe peanut allergy. Allergy. 2009;64:1218-20).

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The BRC has recently provided support to assist in the clinical translation of a promising novel oral tolerance method to treat children with severe peanut allergy, which may have a major impact on clinical care in the shortmedium term (Clark AT et al. Successful oral tolerance induction in severe peanut allergy. Allergy. 2009;64:1218-20).

New diagnostic tests for neglected infectious disease (Lee)

The Lee group has developed a new point of care rapid test for Chlamydia trachomatis, which has been evaluated in 3 clinical sites in the UK with excellent results in performance characteristics and ease-of-use features. The test recently received regulatory approval for use in the European Union, thus paving the way for it to enter clinical practice. Ongoing work supported by the BRC is includes the development of rapid Simple Amplification-Based Nucleic Acid Testing (SAMBA-NAT) Systems for both HIV and Avian Influenza.

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The Lee group has developed a new point of care rapid test for Chlamydia trachomatis, which has been evaluated in 3 clinical sites in the UK with excellent results in performance characteristics and ease-of-use features. The test recently received regulatory approval for use in the European Union, thus paving the way for it to enter clinical practice. Ongoing work supported by the BRC is includes the development of rapid Simple Amplification-Based Nucleic Acid Testing (SAMBA-NAT) Systems for both HIV and Avian Influenza.

A genetic approach to inflammatory bowel disease (Parkes)

Miles Parkes is an NHS gastroenterologist who chairs the International IBD Genetics Consortium. BRC funding has been used to fund research sessions for Dr Parkes, the salary of part time statistician Carlo Berzuini (role: analysis of association data, data QC and analysis for nsSNP data, current modeling for multi-marker cluster analysis) and research nurse Francesca Bredin (who co-ordinates the expanding inflammatory bowel disease DNA collection, undertakes patient phenotyping, data entry), and some reagent costs for DNA collection and extraction.

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Miles Parkes is an NHS gastroenterologist who chairs the International IBD Genetics Consortium. BRC funding has been used to fund research sessions for Dr Parkes, the salary of part time statistician Carlo Berzuini (role: analysis of association data, data QC and analysis for nsSNP data, current modeling for multi-marker cluster analysis) and research nurse Francesca Bredin (who co-ordinates the expanding inflammatory bowel disease DNA collection, undertakes patient phenotyping, data entry), and some reagent costs for DNA collection and extraction.

The consortium has just published a meta-analysis in Crohn's disease in Nature Genetics, and a similar study in Ulcerative Colitis is under review with the same journal ' there are now 100 confirmed genome-wide significant IBD associated genes. Some of these are being followed up using expression analysis to correlate genotype with expression of candidate genes using the BRC-supported Cambridge Bioresource. A large South Asian IBD cohort is being recruited for transethnic studies, in the hope that different LD patterns will help fine-map some of the IBD-associated intervals and hence identify causal variants. Cambridge is also coordinating the IBD consortium involvement in the Immunochip study.

Work in Inflammatory Bowel Disease will be greatly enhanced by the appointment of the first Professor of Gastroenterology at the University of Cambridge, Dr Arthur Kaser from Innsbruck. Dr Kaser brings with him substantial ERC funding, and an enviable track record in Inflammatory Bowel Disease research. The BRC will support the establishment of his translational research programme in Cambridge through the provision of a postdoctoral fellow for two years.

Enhancing Therapeutic Cancer Vaccines by Attacking the Tumoral Stromal Cell (Fearon)

Therapeutic cancer vaccines are ineffective even though they cause expansion of tumor 'specific T cells, because these T cells are inhibited by the tumor stromal microenvironment in both humans and mice. The Fearon lab depleted stromal cells expressing fibroblast activation protein-alpha (FAP), which are found in all human carcinomas, by administering diphtheria toxin (DT) to a mouse transgenic for the human DT receptor driven by fap transcriptional regulatory elements. This caused frank necrosis of LL2/OVA tumors, supporting the proposed detrimental role for the FAP+ cell in the response to therapeutic vaccines ' work now in press with Science.

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Therapeutic cancer vaccines are ineffective even though they cause expansion of tumor 'specific T cells, because these T cells are inhibited by the tumor stromal microenvironment in both humans and mice. The Fearon lab depleted stromal cells expressing fibroblast activation protein-alpha (FAP), which are found in all human carcinomas, by administering diphtheria toxin (DT) to a mouse transgenic for the human DT receptor driven by fap transcriptional regulatory elements. This caused frank necrosis of LL2/OVA tumors, supporting the proposed detrimental role for the FAP+ cell in the response to therapeutic vaccines ' work now in press with Science.

This research next aims to determine the signals that cause the development of the FAP+ stromal cell, and the means by which the FAP+ cell causes local immunosuppression. An additional interesting aspect of this cell type is that it exists in normal mice and regulates hematopoiesis and appetite, the former probably via forming the osteoblastic niche and the latter by unknown means.

Pharmacological interruption of either of these processes would be predicted to enhance the efficacy of therapeutic cancer vaccines. Depletion of FAP+ stromal cells also controls the growth of pancreatic ductal adenocarcinomas in the KPC mouse; interesting because this is the best murine model of a human adenocarcinoma. The focus on this stromal cell was prompted by clinical studies of the occurrence of FAP+ cells in human cancers, an autoimmune disease (RA), and chronic tissue repair (cirrhosis).

Therefore, they represent direct interventional extensions of clinical research that was limited initially to correlative analyses in mouse models, but now will be translated back to the clinic.

Infectious Diseases and Geosentinel (Lever)

BRC funding has supported the employment of a research nurse for 4 days/week to support Geosentinel (www.geosentinel.org), a network of travel/tropical medicine clinics initiated by the International Society of Travel Medicine (ISTM) and the Centers for Disease Control (CDC). These clinics, of which Addenbrooke's is the only UK representative, detect geographic and temporal trends in morbidity among travellers, immigrants and refugees, providing information to travellers, and 'using' travellers to serve as sentinels for changes.

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BRC funding has supported the employment of a research nurse for 4 days/week to support Geosentinel (www.geosentinel.org), a network of travel/tropical medicine clinics initiated by the International Society of Travel Medicine (ISTM) and the Centers for Disease Control (CDC). These clinics, of which Addenbrooke's is the only UK representative, detect geographic and temporal trends in morbidity among travellers, immigrants and refugees, providing information to travellers, and 'using' travellers to serve as sentinels for changes.

The research nurse collates and enters real-time data into the Geosentinel database. Contributing to the care of travellers locally and internationally and the network is also being developed for large scale epidemiological studies and epidemic intelligence and response. BRC support has also contributed to studies on Pentamidine usage, Dengue and Chikungunya, and to translational aspects of prevention of chronic rejection in organ transplantation and development of novel therapies against common viral pathogens such as rotaviruses which kill 500,000 children worldwide annually.

Important developments are taking place in Infectious Diseases in Cambridge, with the appointment of Professor Sharon Peacock as the Professor of Microbiology, and of Sergey Nejentsev working on the genetics of defence against tuberculosis. Prof Peacock runs an international programme examining the development of antibiotic resistance in bacteria, and in addition, in collaboration with the Wellcome Trust Sanger Institute, is building a programme to develop molecular techniques for rapid microbiological diagnosis and sensitivity assessment, using novel genomic technology.

Neutrophils and lung disease (Chilvers)

The Chilvers group has established novel methodology to define the kinetics of neutrophil transit across the lung in man using autologous 111In-labelled neutrophils and 99mTc-labelled red blood cells, demonstrating that more than 95% of neutrophils transit the capillary network rapidly, and that smokers have a greater neutrophil loss compared to severitymatched non-smoking COPD patients.

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The Chilvers group has established novel methodology to define the kinetics of neutrophil transit across the lung in man using autologous 111In-labelled neutrophils and 99mTc-labelled red blood cells, demonstrating that more than 95% of neutrophils transit the capillary network rapidly, and that smokers have a greater neutrophil loss compared to severitymatched non-smoking COPD patients.

More recently, NIHR BRC funding has supported the establishment of a method which has allowed the measurement of eosinophil circulating half life in man, something never achieved before. The eosinophil t1/2 is 21 hours (compared to 7 hours for neutrophils) and suggests that early re-circulation occurs, as with lymphocytes. This method should allow them to establish sites of eosinophil destruction in health and disease, to quantify lung uptake in asthma, and to develop a clinically applicable 111In-labelled eosinophil scan.

Transcriptional signatures in auto-immune disease

In the Immunity and Infection theme, gene-expression based biomarkers have been established in common and debilitating autoimmune diseases, which could allow individual tailoring of potentially toxic immunosuppressive therapy. Transcriptional profiling of purified CD8(+) T cells, which avoids the confounding influences of unseparated cells, has identified two distinct subject subgroups predicting long-term prognosis in antineutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV), and systemic lupus erythematosus (SLE).

[Read more...]

In the Immunity and Infection theme, gene-expression based biomarkers have been established in common and debilitating autoimmune diseases, which could allow individual tailoring of potentially toxic immunosuppressive therapy. Transcriptional profiling of purified CD8(+) T cells, which avoids the confounding influences of unseparated cells, has identified two distinct subject subgroups predicting long-term prognosis in antineutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV), and systemic lupus erythematosus (SLE).

These subgroups, which are also found in the normal population and can be identified by measuring expression of only three genes, raise the prospect of individualised therapy and suggest new potential therapeutic targets in autoimmunity. These biomarkers have been patented and prospective clinical studies are being initiated.

See Immunity and Infection Key Publications

Translational medicine and autoimmunity (Smith, Jayne)

The BRC has funded a bio-informatics post to support the biomarker discovery programme run by the Smith laboratory, which has resulted in the discovery of a prognostic biomarker which has been patented, published in Nature Medicine, and is soon to enter clinical trials. In addition to the initial findings made in SLE and vasculitis, these findings have been replicated in Inflammatory Bowel Disease and transplantation.

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The BRC has funded a bio-informatics post to support the biomarker discovery programme run by the Smith laboratory, which has resulted in the discovery of a prognostic biomarker which has been patented, published in Nature Medicine, and is soon to enter clinical trials. In addition to the initial findings made in SLE and vasculitis, these findings have been replicated in Inflammatory Bowel Disease and transplantation.

This post, held by Dr Tim Rayner, has also provided the expertise which allowed the initiation of the European Vasculitis Genetics Consortium in Cambridge, and led to the BHF funding the first genome-wide association study in ANCA-associated vasculitis, due for completion in late 2010.

David Jayne has continued an active programme of clinical research in vasculitis and related autoimmune diseases, which has been enabled by the BRC funding his research time. This has, for example, resulted in a definitive paper on the use of Rituximab in the treatment of ANCA-associated vasculitis published in the New England Journal, which will assist in registration of the drug for this indication.